ngclearn package

Subpackages

• ngclearn.components package
  • Subpackages
    • ngclearn.components.input_encoders package
      • Submodules
      • ngclearn.components.input_encoders.bernoulliCell module
      • ngclearn.components.input_encoders.ganglionCell module
      • ngclearn.components.input_encoders.gridCell module
      • ngclearn.components.input_encoders.latencyCell module
      • ngclearn.components.input_encoders.phasorCell module
      • ngclearn.components.input_encoders.placeCell module
      • ngclearn.components.input_encoders.poissonCell module
      • ngclearn.components.input_encoders.populationCoderCell module
      • Module contents
    • ngclearn.components.neurons package
      • Subpackages
      • Module contents
    • ngclearn.components.other package
      • Submodules
      • ngclearn.components.other.expKernel module
      • ngclearn.components.other.varTrace module
      • Module contents
    • ngclearn.components.synapses package
      • Subpackages
      • Submodules
      • ngclearn.components.synapses.STPDenseSynapse module
      • ngclearn.components.synapses.alphaSynapse module
      • ngclearn.components.synapses.denseSynapse module
      • ngclearn.components.synapses.doubleExpSynapse module
      • ngclearn.components.synapses.exponentialSynapse module
      • ngclearn.components.synapses.mpsSynapse module
      • ngclearn.components.synapses.staticSynapse module
      • Module contents
  • Submodules
  • ngclearn.components.jaxComponent module
    • JaxComponent
      • JaxComponent.load()
      • JaxComponent.save()
  • Module contents
• ngclearn.modules package
  • Subpackages
    • ngclearn.modules.regression package
      • Submodules
      • ngclearn.modules.regression.elastic_net module
      • ngclearn.modules.regression.lasso module
      • ngclearn.modules.regression.ridge module
      • Module contents
  • Module contents
• ngclearn.operations package
  • Module contents
• ngclearn.utils package
  • Subpackages
    • ngclearn.utils.analysis package
      • Submodules
      • ngclearn.utils.analysis.attentive_probe module
      • ngclearn.utils.analysis.effective_dim module
      • ngclearn.utils.analysis.kmeans_probe module
      • ngclearn.utils.analysis.knn_probe module
      • ngclearn.utils.analysis.linear_probe module
      • ngclearn.utils.analysis.probe module
      • Module contents
    • ngclearn.utils.density package
      • Submodules
      • ngclearn.utils.density.bernoulliMixture module
      • ngclearn.utils.density.exponentialMixture module
      • ngclearn.utils.density.gaussianMixture module
      • ngclearn.utils.density.mixture module
      • Module contents
    • ngclearn.utils.diffeq package
      • Submodules
      • ngclearn.utils.diffeq.ode_utils module
      • ngclearn.utils.diffeq.odes module
      • Module contents
    • ngclearn.utils.feature_dictionaries package
      • Submodules
      • ngclearn.utils.feature_dictionaries.polynomialLibrary module
      • Module contents
    • ngclearn.utils.filters package
      • Submodules
      • ngclearn.utils.filters.cortical_gauss_filter module
      • ngclearn.utils.filters.gauss_filter module
      • Module contents
    • ngclearn.utils.masks package
      • Submodules
      • ngclearn.utils.masks.multiblock2d module
      • Module contents
    • ngclearn.utils.optim package
      • Submodules
      • ngclearn.utils.optim.adam module
      • ngclearn.utils.optim.nag module
      • ngclearn.utils.optim.optim_utils module
      • ngclearn.utils.optim.sgd module
      • Module contents
    • ngclearn.utils.viz package
      • Submodules
      • ngclearn.utils.viz.classification_analysis module
      • ngclearn.utils.viz.compartment_plot module
      • ngclearn.utils.viz.compartment_raster module
      • ngclearn.utils.viz.dim_reduce module
      • ngclearn.utils.viz.raster module
      • ngclearn.utils.viz.spike_plot module
      • ngclearn.utils.viz.synapse_plot module
      • Module contents
  • Submodules
  • ngclearn.utils.JaxProcessesMixin module
    • JaxCompiledMethod
      • JaxCompiledMethod.source_fn
      • JaxCompiledMethod.wrap()
    • JaxJointProcess
    • JaxMethodProcess
    • JaxProcessesMixin
      • JaxProcessesMixin.clear()
      • JaxProcessesMixin.compile()
      • JaxProcessesMixin.previous_result
      • JaxProcessesMixin.previous_state
      • JaxProcessesMixin.scan()
  • ngclearn.utils.data_loader module
    • DataLoader
  • ngclearn.utils.distribution_generator module
    • DistributionGenerator
      • DistributionGenerator.constant()
      • DistributionGenerator.fan_in_gaussian()
      • DistributionGenerator.fan_in_uniform()
      • DistributionGenerator.gaussian()
      • DistributionGenerator.log_gaussian()
      • DistributionGenerator.uniform()
    • DistributionInitializer
    • DistributionParams
      • DistributionParams.amax
      • DistributionParams.amin
      • DistributionParams.col_mask
      • DistributionParams.dtype
      • DistributionParams.eye
      • DistributionParams.hollow
      • DistributionParams.lower_triangle
      • DistributionParams.row_mask
      • DistributionParams.upper_triangle
      • DistributionParams.use_numpy
  • ngclearn.utils.io_utils module
    • deserialize()
    • load_pkl()
    • makedir()
    • makedirs()
    • save_pkl()
    • serialize()
  • ngclearn.utils.matrix_utils module
    • decompose_to_mps()
  • ngclearn.utils.metric_utils module
    • analyze_scores()
    • measure_ACC()
    • measure_ARI()
    • measure_BCE()
    • measure_BIC()
    • measure_CatNLL()
    • measure_FMI()
    • measure_KLD()
    • measure_MAE()
    • measure_MSE()
    • measure_RMSE()
    • measure_Vmeasure()
    • measure_breadth_TC()
    • measure_excess_kurtosis()
    • measure_fanoFactor()
    • measure_firingRate()
    • measure_gaussian_KLD()
    • measure_gini_index()
    • measure_hoyer_sparsity()
    • measure_sparsity()
  • ngclearn.utils.model_utils module
    • binarize()
    • bkwta()
    • chebyshev_norm()
    • clamp_max()
    • clamp_min()
    • clip()
    • create_block_matrix()
    • create_function()
    • d_clip()
    • d_elu()
    • d_gelu()
    • d_heaviside()
    • d_identity()
    • d_kwta()
    • d_lkwta()
    • d_lrelu()
    • d_quantile_lkwta()
    • d_relu()
    • d_relu6()
    • d_sigmoid()
    • d_silu()
    • d_sine()
    • d_softmax()
    • d_softplus()
    • d_swish()
    • d_tanh()
    • d_telu()
    • d_threshold()
    • drop_out()
    • elu()
    • eye_wrapped()
    • gelu()
    • group_mean()
    • heaviside()
    • identity()
    • inverse_logistic()
    • inverse_sigmoid()
    • inverse_tanh()
    • kwta()
    • layer_normalize()
    • lkwta()
    • lrelu()
    • normalize_block_matrix()
    • normalize_matrix()
    • one_hot()
    • pull_equations()
    • quantile_lkwta()
    • relu()
    • relu6()
    • sigmoid()
    • silu()
    • sine()
    • softmax()
    • softplus()
    • swish()
    • tanh()
    • telu()
    • tensorstats()
    • threshold()
    • threshold_cauchy()
    • threshold_soft()
  • ngclearn.utils.patch module
    • PatchGenerator
      • PatchGenerator.target()
  • ngclearn.utils.patch_utils module
    • Create_Patches
      • Create_Patches.create_patches()
    • generate_pacthify_patch_set()
    • generate_patch_set()
    • patch_with_overlap()
    • patch_with_stride()
  • ngclearn.utils.surrogate_fx module
    • arctan_estimator()
    • secant_lif_estimator()
    • straight_through_estimator()
    • triangular_estimator()
  • Module contents

Module contents